• Acknowledging this work
• Warranty
• License
• Support
• Supported platforms
• Conventions used in this manual

• Unix/Linux
• Microsoft Windows
• Mac Os X

• Overview
• Command line usage
• Supported file formats and data types
• MRView

• Importing DW data
• Data pre-processing
• ROI selection
• Performing fibre-tracking

• The MRtrix configuration file
• The MRtrix file format
• References
• The GNU General Public License

Donald Tournier
MRtrix version 0.2.11
Last updated 2013-03-13